Author

Arnau Vich Vila 1

1 University Medical Centre Groningen,Department of Gastroenterology and Hepatology,Groningen,Netherlands

ANALYSIS OF 1792 GUT METAGENOMES REVEALS MICROBIAL TREATMENT TARGETS FOR INFLAMMATORY BOWEL DISEASE AND IRRITABLE BOWEL SYNDROME

Arnau Vich Vila, Floris Imhann, Valerie Collij, Thomas Gurry, Alexander Kurilshikov, Soesma Jankipersadsing, Zlatan Mujagic, Marc-Jan Bonder, Xiaofang Jiang, Lude H. Franke, Gerard Dijkstra, Eleonora Anna Margaretha Festen, Jing Fu, R. Xavier, Eric Alm, Cisca Wijmenga, Daisy Mae Jonkers, Alexandra Zhernakova, Rinse K. Wee

Anti-inflammatory gut microbial pathways are decreased during Crohn's disease exacerbations

Marjolein Anthonia Ymkje Klaassen, Floris Imhann, Valerie Collij, Jingyuan Fu, Cisca Wijmenga, Gerard Dijkstra, Eleonora A.M. Festen, Ranko Gacesa, Arnau Vich Vila, Rinse Karel Weersma

CHARACTERISING THE SMALL INTESTINE MICROBIOTA USING INDIVIDUALS WITH AN ILEOSTOMY OR ILEOANAL POUCH IN THE CONTEXT OF IBD

Renate Ama Augusta Ruigrok, Valerie Collij, Marjolein Anthonia Ymkje Klaassen, Paula Sureda, Bernadien H. Jansen, Michiel Voskuil, Jingyuan Fu, Cisca Wijmenga, Alexandra Zhernakova, Rinse K. Weersma, Arnau Vich Vila

Combining absolute quantification of fecal bacteria with metagenomic sequencing data improves the characterization of the gut microbiome of patients with Crohn's disease

Arnau Vich Vila, Anna Boddeke, Alexander Kurilshikov, Valerie Collij, Paula Sureda Horrach, Julius Z. H. von Martels, Arno R. Bourgonje, Marjolein Anthonia Ymkje Klaassen, Shixian Hu, Dianne B.H Jansen, Klaas Nico Faber, Gerard Dijkstra, Alexandra Zhernakova, Hermie J. M. Harmsen, Rinse K. Weersma

Composition and function of gut microbiota affects the response rate and survival of melanoma patients treated with immune checkpoint inhibitors

Ranko Gacesa, Thijs T. Wind, Arnau Vich Vila, Jacco J. de Haan, Mathilde Jalving, Geke A.P. Hospers

DISRUPTION OF THE GUT MICROBIOME IN RENAL TRANSPLANT RECIPIENTS: RESULTS FROM THE TRANSPLANTLINES COHORT AND BIOBANK STUDY

J Casper Swarte, Yanni Li, Shixian Hu, Ranko Gacesa, Arnau Vich Vila, Rianne Douwes, Hans Blokzijl, Hermie J. M. Harmsen, Stefan P Berger, Jan Stephan F Sanders, E.A.M. (Noortje) Festen, Alexandra Petrovna Zhernakova, Jingyuan Fu, Cisca Wijmenga, Stephan J L Bakker, Rinse K. Weersma

GUT MICROBIAL CHANGES IN RESPONSE TO VEDOLIZUMAB TREATMENT IN PATIENTS WITH INFLAMMATORY BOWEL DISEASE

Valerie Collij, Marjolein Anthonia Ymkje Klaassen, Werna T. C. Uniken Venema, Amber Bangma, Gerard Dijkstra, Eleonora A.M. Festen, Marijn C. Visschedijk, Arnau Vich Vila, Ranko Gacesa, Rinse K. Weersma

Gut microbial co-abundance networks identify functional hubs for inflammatory bowel disease and obesity

Lianmin Chen, Valerie Collij, Martin Jaeger, Inge van de Munckhoff, Arnau Vich Vila, Alexander Kurilshikov, Ranko Gacesa, Trishla Sinha, Marije Oosting, Leo A Joosten, Joost Rutten, Niels Riksen, Ramnik J. Xavier, Folkert Kuipers, Cisca Wijmenga, Alexandra Zhernakova, Mihai Netea, Rinse K. Weersma, Jingyuan Fu

HOST-GENETICS, DYSBIOSIS AND CLINICAL HISTORY EXPLAINS FECAL METABOLIC ALTERATIONS IN PATIENTS WITH INFLAMMATORY BOWEL DISEASE

Arnau Vich Vila, Shixian Hu, Laura Bolte, Valerie Collij, Bernadien H. Jansen, Renate A.A. Ruigrok, Galeb Abu-Ali, Cosmas Giallourakis, Jessica Schneider, John Parkinson, Amal Al Garawi, Alexander Kurilshikov, Ranko Gacesa, Jingyuan Fu, Alexandra Zhernakova, Rinse K. Weersma

Impact of 41 commonly used drugs on the composition, metabolic function and resistome of the gut microbiome

Arnau Vich Vila, Valerie Collij, Serena Sanna, Floris Imhann, Trishla Sinha, Zlatan Mujagic, Daisy Mae Jonkers, Ad A Masclee, Jingyuan Fu, Alexander Kurilshikov, Cisca Wijmenga, Alexandra Zhernakova, Rinse K. Weersma

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